STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG58699.1H-type lectin domain-containing protein. (116 aa)    
Predicted Functional Partners:
SHH40819.1
Sulfotransferase family protein.
  
     0.772
SHH69718.1
Hypothetical protein.
  
     0.772
SHH40788.1
Core-2/I-Branching enzyme.
  
     0.771
SHH26227.1
Hypothetical protein.
  
     0.768
SHG89924.1
Hypothetical protein.
  
     0.765
SHH57579.1
Hypothetical protein.
  
     0.765
SHG50167.1
Hypothetical protein.
  
     0.762
SHG89962.1
Hypothetical protein.
  
     0.758
SHG25810.1
Hypothetical protein.
  
     0.740
SHH54996.1
Hypothetical protein.
  
     0.726
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.