STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG87220.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
SHG32543.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.644
SHH67527.1
SlyX protein.
  
     0.631
SHG92088.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.559
SHG87249.1
Putative glutathione S-transferase.
       0.549
SHH26227.1
Hypothetical protein.
  
     0.542
SHH57579.1
Hypothetical protein.
  
     0.532
SHG87279.1
L-threonine O-3-phosphate decarboxylase.
 
     0.531
SHH56030.1
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
  
     0.521
SHH69718.1
Hypothetical protein.
  
     0.518
SHH40819.1
Sulfotransferase family protein.
  
     0.499
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.