STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG91270.1Ammonium transporter, Amt family. (443 aa)    
Predicted Functional Partners:
SHG91227.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SHG41167.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.998
SHH48209.1
Glutamate synthase (NADPH/NADH) large chain.
 
  
 0.897
SHG41768.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
   
 0.887
SHH60465.1
Diguanylate cyclase (GGDEF) domain-containing protein; Manually curated.
 
      0.880
SHG24771.1
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.668
SHH29469.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
     0.591
SHG59783.1
PAS domain S-box-containing protein.
 
  
 0.570
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.525
SHG91184.1
Membrane carboxypeptidase (penicillin-binding protein).
       0.507
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.