STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH12691.1Peptide/nickel transport system permease protein. (327 aa)    
Predicted Functional Partners:
SHH12654.1
Peptide/nickel transport system permease protein.
 
 0.978
SHH12619.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.946
SHH12725.1
Peptide/nickel transport system substrate-binding protein.
 
  0.941
SHH15411.1
Peptide/nickel transport system permease protein.
 
 0.907
SHH15331.1
Peptide/nickel transport system substrate-binding protein.
  
  0.887
SHH18297.1
Peptide/nickel transport system substrate-binding protein.
  
  0.887
SHG84578.1
Oligopeptide transport system permease protein.
 
 0.864
SHG84618.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.839
SHH86862.1
Peptide/nickel transport system permease protein.
 
 0.821
SHG84660.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.806
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.