STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH12884.1Chromosome partitioning protein, ParB family; Belongs to the ParB family. (340 aa)    
Predicted Functional Partners:
SHH12850.1
Chromosome partitioning protein.
 
   0.975
SHH11786.1
Chromosome partitioning protein.
 
   0.893
SHH12915.1
Replication initiation protein RepC.
 
   
 0.881
SHH86076.1
Chromosome partitioning protein.
 
   0.833
SHH78962.1
Chromosome partitioning protein.
 
   0.778
SHH11867.1
Replication initiation protein RepC.
 
   
 0.770
SHG99802.1
Chromosome partitioning protein.
 
 
 0.648
SHH86043.1
Plasmid replication initiator protein.
  
     0.587
SHG88883.1
Chromosome partitioning protein.
  
 
 0.584
SHH11748.1
Resolvase, N terminal domain.
 
     0.523
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.