STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH15649.1Putative tricarboxylic transport membrane protein. (499 aa)    
Predicted Functional Partners:
SHH15571.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.932
SHH16283.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.851
SHH18058.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.851
SHG86216.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.847
SHH80103.1
Putative tricarboxylic transport membrane protein.
  
    0.827
SHH15611.1
Tripartite tricarboxylate transporter TctB family protein.
       0.773
SHH15682.1
Transcriptional regulator, TetR family.
       0.773
SHH80130.1
Putative tricarboxylic transport membrane protein.
  
 
 0.533
SHH16244.1
Tripartite tricarboxylate transporter TctB family protein.
  
 
 0.521
SHH15716.1
Predicted dehydrogenase.
       0.429
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.