STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH16812.1Thiamine kinase. (309 aa)    
Predicted Functional Partners:
SHH16856.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
     0.940
SHH16691.1
Glycine betaine/proline transport system substrate-binding protein.
 
     0.774
SHH16605.1
Glycine betaine/proline transport system permease protein.
  
     0.751
SHH16517.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
     0.749
SHH16945.1
Transcriptional regulator, DeoR family.
 
     0.528
SHH16895.1
AraC family transcriptional regulator, carnitine catabolism transcriptional activator.
       0.508
SHG27113.1
Glycosyltransferase, GT2 family.
  
     0.489
SHG81776.1
Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family.
   
 
  0.419
SHG61828.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
     0.406
SHG81859.1
Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
   
 
  0.404
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.