STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH18413.13-oxoacyl-[acyl-carrier protein] reductase. (250 aa)    
Predicted Functional Partners:
SHH54662.1
Acyl transferase domain-containing protein.
  
 0.888
SHH48209.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.837
SHH18488.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
  0.803
SHG48845.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
  
  0.761
SHH18549.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
   0.744
SHH18450.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
    
0.741
SHH75372.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.734
eno-2
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  0.728
SHH54579.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.666
SHG40778.1
[acyl-carrier-protein] S-malonyltransferase.
 
 
  0.662
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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