STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH28669.1Glyoxylase, beta-lactamase superfamily II. (343 aa)    
Predicted Functional Partners:
SHH28721.1
Hypothetical protein.
       0.857
SHH28628.1
Hypothetical protein.
 
    0.817
SHH28591.1
Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.715
SHG61551.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.683
SHH28789.1
Hypothetical protein.
       0.666
SHH28755.1
Aa3 type cytochrome c oxidase subunit IV.
       0.664
SHG28794.1
Hypothetical protein.
  
  0.625
SHG29436.1
Acyl carrier protein.
  
 
   0.509
SHG48700.1
Rhodanese-related sulfurtransferase.
   
  0.461
SHH01272.1
Rhodanese-related sulfurtransferase.
   
  0.461
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.