STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH65408.1Predicted transcriptional regulator. (130 aa)    
Predicted Functional Partners:
SHH65375.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
 
 0.986
SHG59822.1
Cu+-exporting ATPase.
  
  
 0.923
SHG51407.1
Hypothetical protein.
 
  
  0.558
SHH65184.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
     0.498
SHH65314.1
Predicted small integral membrane protein.
 
     0.488
dnaE2
Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
     
 0.478
SHH65434.1
Protein ImuB.
       0.470
SHH65344.1
Predicted N-acetyltransferase YhbS.
       0.459
SHG45812.1
Sporulation related domain-containing protein.
    
  0.421
SHG28222.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.413
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.