STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH67697.1Putative peptidoglycan binding domain-containing protein. (584 aa)    
Predicted Functional Partners:
SHH67753.1
Hypothetical protein.
 
     0.895
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.776
SHH55155.1
Hypothetical protein.
  
     0.771
SHH56614.1
Phasin protein.
  
     0.771
SHG25141.1
Hypothetical protein.
  
     0.753
SHG29746.1
Hypothetical protein.
  
     0.747
SHG78150.1
Do/DeqQ family serine protease.
  
  
  0.739
SHH28789.1
Hypothetical protein.
  
     0.718
SHH27793.1
Hypothetical protein.
  
     0.711
SHH71791.1
Hypothetical protein.
  
     0.702
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.