STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH75931.1Predicted small integral membrane protein. (91 aa)    
Predicted Functional Partners:
SHH75875.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
    0.942
SHH75902.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
    0.942
SHH75836.1
Glycerol transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.937
SHH75803.1
Glycerol transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.936
SHH75959.1
Glycerol transport system substrate-binding protein.
 
    0.921
SHH65155.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
    0.794
SHH65277.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
    0.789
SHH65248.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
    0.776
SHH75769.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.769
SHH65218.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
  
     0.768
Your Current Organism:
Cognatishimia maritima
NCBI taxonomy Id: 870908
Other names: C. maritima, CCUG 60021, DSM 28223, KCTC 23347, Thalassobius maritima, Thalassobius maritimus, Thalassobius maritimus Park et al. 2012, Thalassobius sp. GSW-6, Thalassobius sp. GSW-M6, strain GSW-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.