Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BG60_00895Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
BG60_00900
Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.938
BG60_00890
Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.858
BG60_00905
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.836
BG60_00910
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.814
BG60_25565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.780
BG60_37415
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.777
BG60_00915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
BG60_01280
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.697
BG60_10490
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.690
BG60_17240
UDP- phosphate galactosephosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.689
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.