Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_05310N-succinylarginine dihydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)    
Predicted Functional Partners:
BG60_05320
Arginine N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
BG60_05325
Arginine N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
BG60_05305
Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
BG60_05330
Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
astD
A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
argD
Acetylornithine aminotransferase; DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.919
BG60_36445
NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.855
BG60_05340
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
BG60_05335
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.529
BG60_05300
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.506
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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