Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_07050NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)    
Predicted Functional Partners:
BG60_17680
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.761
BG60_21095
NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.725
BG60_13900
Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.700
BG60_13520
Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.678
BG60_16700
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.678
BG60_25185
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.625
BG60_25845
NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.625
BG60_23410
Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.610
BG60_19050
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.582
BG60_22250
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.573
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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