Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_07435Catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)    
Predicted Functional Partners:
BG60_07440
Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.945
BG60_19880
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.849
BG60_07445
BetI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.846
BG60_14855
Phosphatidylserine decarboxylase; Catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.844
BG60_19485
Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.844
BG60_00820
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.756
BG60_20525
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.756
BG60_37115
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.749
BG60_19925
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.718
BG60_22960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.709
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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