Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
BG60_10110ADP-L-glycero-D-manno-heptose-6-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
BG60_10115
Heptose 1-phosphate adenyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
BG60_12845
ADP-D-glycero-D-manno-heptose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
BG60_10120
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
BG60_10410
3-deoxy-D-manno-octulosonic acid transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.882
BG60_14405
ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.816
BG60_15980
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.805
BG60_15715
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.804
BG60_08135
Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.790
BG60_37115
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.780
BG60_15670
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.778
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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