Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_11755Peptidase A8; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
BG60_11750
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
BG60_11760
Phosphopantothenate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.815
BG60_11505
Diacylglyceryl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.732
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.664
BG60_17400
Ribosome-binding factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.659
BG60_23140
Trigger factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.652
BG60_32505
Molecular chaperone SurA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.627
BG60_11690
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.621
BG60_11770
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Catalyzes the formation of dUMP from dUTP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.601
BG60_26915
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.599
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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