Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_12260Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
BG60_12265
Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
BG60_30165
Blocks the formation of polar Z-ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.906
BG60_12250
ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.904
BG60_12270
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.894
BG60_12255
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.878
BG60_30160
ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.824
BG60_31965
Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.779
BG60_12195
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
BG60_11490
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.744
BG60_32410
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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