Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_12830Alginate regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
BG60_12805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
glmU
Forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.781
BG60_13110
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
BG60_12970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
BG60_12765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
BG60_12825
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.723
BG60_14280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
BG60_32565
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
BG60_33730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
BG60_12820
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.694
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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