Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
BG60_12840Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
BG60_12845
ADP-D-glycero-D-manno-heptose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.681
BG60_11635
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.566
BG60_28705
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.566
BG60_31440
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.566
BG60_32610
N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
BG60_15860
Cytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
BG60_26995
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
BG60_24390
UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
BG60_10130
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
BG60_06280
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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