Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_12995Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
BG60_13000
Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
BG60_03825
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.981
BG60_04845
protein-PII uridylyltransferase; Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
BG60_28640
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.946
BG60_02020
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.821
BG60_12340
Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.805
BG60_28685
Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.759
BG60_15980
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.718
glnA
Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.694
BG60_05940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.602
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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