Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_13290Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)    
Predicted Functional Partners:
BG60_13285
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.950
ipk
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
BG60_31985
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.773
BG60_13295
formamidopyrimidine-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.721
BG60_13345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.672
BG60_13300
Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
BG60_12755
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.612
BG60_13965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
BG60_26620
Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
BG60_13195
Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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