Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_15070UDP-2,3-diacylglucosamine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
BG60_04765
lipid-A-disaccharide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
BG60_04780
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.939
BG60_15075
Cyclophilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.842
BG60_16170
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
BG60_15080
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.715
BG60_07960
Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.711
BG60_14935
Cell division protein FtsB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
BG60_32835
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.676
BG60_31985
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.643
BG60_32500
LPS biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.643
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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