Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_15865Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
BG60_15860
Cytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
BG60_08570
Heme ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
BG60_08555
Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.938
BG60_34435
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.925
BG60_08575
Cytochrome C biogenesis protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.899
BG60_26995
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
BG60_12965
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.766
BG60_30270
Catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.703
BG60_15875
Sulfite oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
BG60_27190
glutamyl-tRNA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.626
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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