Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_17630GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
BG60_15980
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.822
BG60_10035
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
BG60_12805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.760
BG60_14830
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
BG60_32330
Barnase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
BG60_14430
Branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
BG60_10160
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.744
BG60_29925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
BG60_14825
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
BG60_22285
Ribonuclease III; Cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.690
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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