Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_18705Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
BG60_37435
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.827
BG60_33380
Peptidase S1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.762
BG60_19240
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.745
BG60_02285
Glycosyl hydrolase family 88; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.720
BG60_11385
methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.708
BG60_29765
RpiR family transcriptional regulator; Glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.649
BG60_37410
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.637
BG60_37415
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.637
BG60_00620
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.630
BG60_22260
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.620
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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