Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
BG60_18745Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
BG60_18740
Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
BG60_05075
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.659
BG60_05070
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.657
BG60_32660
Kynurenine formamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.652
BG60_13585
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
BG60_19195
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.643
BG60_05055
3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.638
BG60_18730
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.586
BG60_23060
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.537
BG60_36510
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.537
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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