Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_19010Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)    
Predicted Functional Partners:
dkgB
Catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.758
BG60_37755
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.725
BG60_10090
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.683
BG60_19005
EmrB/QacA subfamily drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
BG60_12650
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.602
BG60_11845
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.568
BG60_30855
CbbX; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.563
BG60_04580
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.511
BG60_07270
Pyridoxal 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
BG60_19000
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.440
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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