Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_21060Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
BG60_10445
UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.836
BG60_29765
RpiR family transcriptional regulator; Glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.790
BG60_21055
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
BG60_35245
Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.771
BG60_32290
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.756
BG60_13185
PTS N-acetyl-D-glucosamine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.723
BG60_19740
PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.723
BG60_20995
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.653
BG60_34895
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.653
BG60_16960
Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.647
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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