Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_23020Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
BG60_23025
L-sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.900
BG60_23030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.587
BG60_01415
Quinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
BG60_06680
Pyrroloquinoline quinone biosynthesis protein PqqC; Required in the synthesis of PPQ, but its exact function is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
BG60_06690
Pyrroloquinoline quinone biosynthesis protein PqqE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
BG60_06675
Pyrroloquinoline quinone biosynthesis protein PqqB; Possibly involved in transport of pyrroloquinoline quinone transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
BG60_03840
Sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.472
BG60_30370
Sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.462
BG60_22695
PAAR motif family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
BG60_11340
Pilus assembly protein PapD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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