Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_26070ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (887 aa)    
Predicted Functional Partners:
BG60_26075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
BG60_22185
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.752
BG60_29200
Lipid transporter ATP-binding/permease; Involved in the transport of lipid A across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.744
BG60_13995
Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.703
dnaK
Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.633
BG60_22200
Electron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
BG60_13145
Photosynthetic protein synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
BG60_04840
Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
BG60_29235
glutamyl-Q tRNA(Asp) ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.459
BG60_05150
threonyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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