Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BG60_26780Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)    
Predicted Functional Partners:
BG60_26775
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.887
BG60_25305
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.864
BG60_25300
Phthalate 4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.831
BG60_37115
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.823
BG60_34480
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.821
BG60_02500
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.794
BG60_01080
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
BG60_07025
FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
BG60_16230
Ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
BG60_35505
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
Your Current Organism:
Caballeronia zhejiangensis
NCBI taxonomy Id: 871203
Other names: Burkholderia sp. OP-1, Burkholderia zhejiangensis, C. zhejiangensis, CCTCC AB 2010354, Caballeronia zhejiangensis (Lu et al. 2012) Dobritsa and Samadpour 2016, DSM 28073, KCTC 23300, LMG 27258, LMG:27258, Paraburkholderia zhejiangensis, Paraburkholderia zhejiangensis (Lu et al. 2012) Sawana et al. 2015, strain OP-1
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