STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF87838.1Hypothetical protein. (721 aa)    
Predicted Functional Partners:
SHF87859.1
L-glutaminase.
 
    0.853
SHF87965.1
DUF1680 family protein.
 
     0.813
SHF87811.1
Glycosyl hydrolase family 76.
 
     0.743
SHF87885.1
Hypothetical protein.
       0.715
SHF87943.1
Alpha-1,2-mannosidase, putative.
       0.708
SHF87914.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.699
SHF81494.1
IPT/TIG domain-containing protein.
  
    0.668
SHF81646.1
IPT/TIG domain-containing protein.
  
    0.662
SHE41942.1
IPT/TIG domain-containing protein.
  
    0.643
SHE41071.1
IPT/TIG domain-containing protein.
  
    0.639
Your Current Organism:
Bacteroides faecichinchillae
NCBI taxonomy Id: 871325
Other names: B. faecichinchillae, Bacteroides faecichinchillae Kitahara et al. 2012, CCUG 60873, JCM 17102, strain ST37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.