Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFM47319.1Hypothetical protein; Pfam: PF00872. (123 aa)    
Predicted Functional Partners:
EFM45001.1
Hypothetical protein.
  
     0.773
EFM44963.1
Hypothetical protein.
  
     0.773
EFM46379.1
Hypothetical protein.
 
     0.772
EFM46464.1
Phage prohead protease, HK97 family; COG: COG3740; Pfam: PF04586; InterPro: IPR006433.
  
     0.642
EFM46462.1
Putative phage terminase, large subunit; Pfam: PF03354.
  
     0.605
rpmH
Ribosomal protein L34; Pfam: PF00468; InterPro: IPR000271; Belongs to the bacterial ribosomal protein bL34 family.
  
    0.462
EFM47171.1
Hypothetical protein.
  
     0.450
EFM45677.1
Fimbrial subunit type 1; Pfam: PF05738,PF00746.
  
     0.450
EFM47188.1
Hypothetical protein.
  
  
 0.445
EFM46884.1
Helicase/secretion neighborhood ATPase; COG: COG4962; Pfam: PF00437; InterPro: IPR001482.
   
    0.439
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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