STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM47260.1Phosphoglycerate mutase family protein; COG: COG0406; Pfam: PF00300; InterPro: IPR013078. (229 aa)    
Predicted Functional Partners:
serB
HAD hydrolase, family IB; COG: COG0560; Pfam: PF00702; InterPro: IPR006385.
    
  0.796
EFM45796.1
Hypothetical protein.
  
     0.765
EFM46850.1
Hypothetical protein.
  
     0.757
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; COG: COG0001; Pfam: PF00202; InterPro: IPR004639.
  
    0.754
hemL2
Aminotransferase, class III; COG: COG0001; Pfam: PF00202; InterPro: IPR005814; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.754
EFM46001.1
Hypothetical protein.
  
     0.753
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.752
holA
DNA polymerase III, delta subunit family protein.
 
     0.747
EFM47011.1
Hypothetical protein; COG: COG5512; Pfam: PF05258; InterPro: IPR007922.
  
     0.746
EFM45698.1
Hypothetical protein; COG: COG0789; InterPro: IPR000551.
  
     0.736
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.