STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439. (502 aa)    
Predicted Functional Partners:
EFM46944.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG1172; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family.
 0.992
ydeZ
Branched-chain amino acid ABC transporter, permease protein; COG: COG1172; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family.
 0.990
EFM46942.1
Hypothetical protein; COG: COG1879.
 
 0.989
rbsC
Branched-chain amino acid ABC transporter, permease protein; COG: COG1172; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family.
 0.988
rbsB
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
 
 0.977
rpiB
Sugar-phosphate isomerase, RpiB/LacA/LacB family; Pfam: PF02502; InterPro: IPR003500.
       0.777
EFM46062.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG1079; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family.
  
  0.747
EFM46059.1
Basic membrane protein; COG: COG1744; Pfam: PF02608; InterPro: IPR003760.
 
  
  0.684
EFM46061.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG4603; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.628
cytR
Transcriptional regulator, LacI family; COG: COG1609; Pfam: PF00356,PF00532; InterPro: IPR000843.
  
 
 0.627
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.