STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM46664.1Hypothetical protein. (512 aa)    
Predicted Functional Partners:
EFM46663.1
Hypothetical protein.
      0.882
EFM45995.1
POTRA domain protein, FtsQ-type; Pfam: PF08478.
   
 
 0.829
EFM46983.1
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001460.
    
 
 0.825
pbp
Transglycosylase; COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR001264.
    
 
 0.825
murB
UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; Cell wall formation.
     
 0.745
amiD2
N-acetylmuramoyl-L-alanine amidase; COG: COG0860; Pfam: PF01520; InterPro: IPR002508.
  
 0.587
add
Adenosine deaminase; COG: COG1816; Pfam: PF00962; InterPro: IPR001365.
       0.513
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
    0.478
EFM47148.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF00905; InterPro: IPR001460.
  
 
 0.446
EFM45987.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460.
  
 
 0.446
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.