Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFM46507.1Gram-positive signal peptide protein, YSIRK family; Pfam: PF04122. (637 aa)    
Predicted Functional Partners:
EFM45539.1
Hypothetical protein.
  
 
  0.858
EFM46436.1
Hypothetical protein.
  
 
   0.813
EFM47174.1
LPXTG-motif cell wall anchor domain protein.
  
  
  0.795
EFM46888.1
Hypothetical protein.
  
  
  0.793
EFM46968.1
Hypothetical protein.
  
 
   0.777
EFM47213.1
Hypothetical protein.
  
    0.776
ppx4
Tat pathway signal sequence domain protein; Pfam: PF00089.
  
     0.774
EFM46319.1
Trypsin; Pfam: PF00089,PF04122.
  
     0.774
EFM45964.1
Hypothetical protein.
  
     0.774
EFM45701.1
Putative bacteriochlorophyll 4-vinyl reductase.
  
    0.774
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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