STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM46259.1Peptidase, U32 family; COG: COG0826; Pfam: PF01136; InterPro: IPR001539. (330 aa)    
Predicted Functional Partners:
EFM44958.1
Hypothetical protein.
 
     0.926
nt5e
Haloacid dehalogenase-like hydrolase; COG: COG0546; Pfam: PF00702; InterPro: IPR005834.
 
     0.802
EFM46258.1
DNA (cytosine-5-)-methyltransferase; COG: COG0863; Pfam: PF01555; InterPro: IPR002941; Belongs to the N(4)/N(6)-methyltransferase family.
       0.773
EFM45433.1
O-methyltransferase; COG: COG4122; Pfam: PF01596; InterPro: IPR002935.
  
  
 0.652
pafA2
Putative proteasome accessory factor PafA2; Pfam: PF03316,PF03136; InterPro: IPR004347.
  
  
 0.547
pafA
Putative proteasome accessory factor PafA; Pfam: PF03316,PF03136; InterPro: IPR004347.
  
  
 0.547
rpmF
Ribosomal protein L32; Pfam: PF01783; Belongs to the bacterial ribosomal protein bL32 family.
       0.502
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
    0.465
pheT
phenylalanine--tRNA ligase, beta subunit; COG: COG0072; Pfam: PF01588,PF03483,PF03484,PF03147; InterPro: IPR004532; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.424
EFM46326.1
RNA methyltransferase; COG: COG1385; Pfam: PF04452; InterPro: IPR006700.
   
    0.414
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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