STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM45616.1SUF system FeS assembly protein, NifU family; COG: COG0822; Pfam: PF01592; InterPro: IPR002871. (164 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.999
EFM45615.1
Hypothetical protein; COG: COG2151; Pfam: PF01883; InterPro: IPR002744.
 
    0.997
sufC
FeS assembly ATPase SufC; COG: COG0396; Pfam: PF00005; InterPro: IPR010230.
 
  
 0.992
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.967
sufD
FeS assembly protein SufD; COG: COG0719; Pfam: PF01458; InterPro: IPR011542.
 
  
 0.960
sufB
FeS assembly protein SufB; COG: COG0719; Pfam: PF01458; InterPro: IPR010231.
 
  
 0.960
EFM46314.1
Hypothetical protein; Pfam: PF07512; InterPro: IPR011091.
  
 0.958
EFM45179.1
Hypothetical protein; Pfam: PF07512; InterPro: IPR011091.
  
 0.958
EFM46586.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; COG: COG0674; Pfam: PF01855,PF01558,PF00037; InterPro: IPR002869.
     
 0.908
EFM45484.1
Phospholipase D domain protein; COG: COG1502; Pfam: PF00614.
   
 
 0.881
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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