Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amyBCarbohydrate binding domain (family 25); Pfam: PF03423. (180 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.988
glgP
Alpha-glucan phosphorylase; COG: COG0058; Pfam: PF00343; InterPro: IPR000811.
  
 
 0.964
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.956
amyA
Alpha-amylase family protein; COG: COG0366; Pfam: PF00128; InterPro: IPR006047; Belongs to the glycosyl hydrolase 13 family.
  
 
  0.945
malQ
4-alpha-glucanotransferase; COG: COG1640; Pfam: PF02446; InterPro: IPR003385.
  
 
 0.904
malQ-2
4-alpha-glucanotransferase; COG: COG1640; Pfam: PF02446; InterPro: IPR003385.
  
 
 0.904
pgm
Phosphoglucomutase, alpha-D-glucose phosphate-specific; COG: COG0033; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR005852.
    
 0.885
galU
Nucleotidyl transferase; COG: COG1210; Pfam: PF00483; InterPro: IPR005835.
    
 0.884
dexB
Alpha amylase, catalytic domain protein; COG: COG0366; Pfam: PF00128; InterPro: IPR013781.
  
 
  0.847
EFM46585.1
CAMP factor (Cfa); Pfam: PF07373; InterPro: IPR010860.
    
 0.824
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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