STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM45290.1ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515. (273 aa)    
Predicted Functional Partners:
EFM45291.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528.
 0.986
upgC
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005,PF03459; InterPro: IPR003593; Belongs to the ABC transporter superfamily.
 
 0.963
EFM45289.1
ABC transporter, solute-binding protein; Pfam: PF01547; InterPro: IPR006059.
 
 0.955
EFM45889.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
 0.940
EFM46815.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
  0.922
EFM45888.1
ABC transporter, solute-binding protein; COG: COG1653; Pfam: PF01547; InterPro: IPR006059.
 0.922
EFM46566.1
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005,PF08402; InterPro: IPR003593; Belongs to the ABC transporter superfamily.
 
 0.921
EFM46429.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
 
 0.917
EFM45578.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528.
  0.915
EFM45489.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
  0.913
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.