STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM45039.1ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593. (264 aa)    
Predicted Functional Partners:
fecD
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
EFM45041.1
Periplasmic binding protein; Pfam: PF01497.
 
 0.996
EFM45192.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.994
EFM45187.1
Periplasmic binding protein; Pfam: PF01497; InterPro: IPR002491.
  
 0.945
EFM45042.1
Hypothetical protein; Pfam: PF04016; InterPro: IPR007161.
 
    0.722
EFM46412.1
FTR1 family protein; COG: COG0672; Pfam: PF03239.
   
  
 0.602
EFM45043.1
Cupin domain protein; Pfam: PF07883.
       0.568
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
     
 0.461
EFM45297.1
Anchored repeat-type ABC transporter, permease subunit; COG: COG1108; Pfam: PF00950; InterPro: IPR001626.
 
  
 0.440
EFM46676.1
ABC transporter, permease protein; Pfam: PF00528; InterPro: IPR000515.
   
  
 0.418
Your Current Organism:
Mobiluncus mulieris
NCBI taxonomy Id: 871571
Other names: M. mulieris ATCC 35239, Mobiluncus mulieris ATCC 35239, Mobiluncus mulieris str. ATCC 35239, Mobiluncus mulieris strain ATCC 35239
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