STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaQBifunctional protein dnaQ; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (459 aa)    
Predicted Functional Partners:
dnaE
DNA polymerase III, alpha chain.
   
 0.990
dnaX
DNA polymerase III, tau and gamma subunits (DNA elongation factor III); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 0.990
dnaN-2
DNA polymerase III, beta chain.
  
 0.977
holA
Putative DNA polymerase III, delta subunit.
  
 
 0.957
holB
DNA polymerase III, delta prime subunit.
  
 0.937
holC
DNA polymerase III, chi subunit.
   
 0.929
ADY80921.1
Chemotaxis protein histidine kinase and related kinase.
 
    0.797
dnaN
DNA polymerase III, beta chain.
  
 
 0.786
nudC
Putative NADH pyrophosphatase (NUDIX hydrolase family).
       0.746
mltD
Putative bifunctional protein.
       0.732
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.