STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dasRTranscriptional regulator, GntR family. (215 aa)    
Predicted Functional Partners:
ADY81666.1
Hypothetical protein.
 
    0.893
ADY81667.1
Adenylylsulfate reductase, beta subunit.
 
     0.844
ADY81668.1
Hypothetical protein.
 
    0.813
ADY81671.1
Hypothetical protein.
 
     0.762
hutC
Histidine utilization repressor.
  
   
 0.748
nrtB
Nitrate ABC transporter, permease protein.
 
    0.601
uxuR
Putative transcriptional regulator (GntR family).
  
    0.522
ADY81670.1
Probable ATP-binding component of ABC transporter.
  
    0.510
lldR
L-lactate utilization transcriptional repressor (GntR family).
  
    0.464
ydcN
DNA-binding protein.
  
  
 0.452
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.