STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjiETranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
oxyR-2
Oxidative stress transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.567
ADY81840.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.564
gcvA-2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.544
rbcR
Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.542
aspA
Aspartate ammonia-lyase.
  
    0.520
cynR
Transcription activator of glutamate synthase(LysR family); Belongs to the LysR transcriptional regulatory family.
  
     0.512
ilvY
DNA-binding transcriptional regulator IlvY; Belongs to the LysR transcriptional regulatory family.
  
     0.510
alsR-2
LysR family transcriptional regulatory protein.
  
     0.499
gltC-5
Transcription activator of glutamate synthase operon GltC; Belongs to the LysR transcriptional regulatory family.
  
     0.481
nahR-2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.473
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.