STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoEShort-chain fatty acid transporter (scFAT family). (469 aa)    
Predicted Functional Partners:
atoA
acetoacetyl-CoA transferase, beta subunit.
 
  
 0.739
atoD
acetoacetyl-CoA transferase, alpha subunit.
  
  
 0.647
thlA
Putative acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.617
ADY81691.1
Hypothetical protein.
 
   
 0.455
vanP
Putative porin for vanillate trafficking.
  
   
 0.418
cstA
Starvation-induced protein involved in peptide utilization during carbon starvation.
  
     0.404
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.