STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiB-2Putative oligopeptide binding protein (ABC superfamily, peri_bind). (527 aa)    
Predicted Functional Partners:
y4tP
Putative dipeptide transport protein (ABC superfamily, membrane).
 
 0.986
ADY81743.1
Putative dipeptide transport protein (ABC superfamily, membrane).
 
 0.986
gsiC
Probable ABC transporter, permease protein.
 
 0.984
appC
Probable ABC transporter, permease protein.
 
 0.983
ADY81744.1
Putative dipeptide transporter (ABC superfamily, ATP_bind); Belongs to the ABC transporter superfamily.
 
 
 0.979
gsiA
Probable ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.971
gsiB
Peptide ABC transporter, periplasmic peptide-binding protein, putative.
  
  
 
0.903
hbpA
Oligopeptide ABC transporter, solute-binding protein.
  
  
  0.747
yejB
Putative oligopeptide transport protein (ABC superfamily, membrane).
 
   
 0.718
yejF
Putative oligopeptide transport protein (ABC superfamily, ATP-bind).
 
    0.715
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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