Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADY82155.1 | aroA | BDGL_001569 | BDGL_001767 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.989 |
| ADY82155.1 | aroC | BDGL_001569 | BDGL_001055 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.956 |
| ADY82155.1 | basJ | BDGL_001569 | BDGL_001860 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Isochorismate synthetase. | 0.895 |
| ADY82155.1 | pheA | BDGL_001569 | BDGL_001768 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Bifunctional protein. | 0.918 |
| ADY82155.1 | trpE | BDGL_001569 | BDGL_003184 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.913 |
| ADY82155.1 | trpG | BDGL_001569 | BDGL_001844 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Bifunctional protein trpG. | 0.916 |
| ADY82155.1 | tyrB | BDGL_001569 | BDGL_002995 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Tyrosine aminotransferase, tyrosine repressible, PLP-dependent. | 0.916 |
| ADY82155.1 | ubiC | BDGL_001569 | BDGL_001840 | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | Chorismate pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.816 |
| aroA | ADY82155.1 | BDGL_001767 | BDGL_001569 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.989 |
| aroA | aroC | BDGL_001767 | BDGL_001055 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.999 |
| aroA | aspC | BDGL_001767 | BDGL_001978 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Aspartate aminotransferase. | 0.949 |
| aroA | basJ | BDGL_001767 | BDGL_001860 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Isochorismate synthetase. | 0.879 |
| aroA | pheA | BDGL_001767 | BDGL_001768 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Bifunctional protein. | 0.999 |
| aroA | trpE | BDGL_001767 | BDGL_003184 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.578 |
| aroA | trpG | BDGL_001767 | BDGL_001844 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Bifunctional protein trpG. | 0.648 |
| aroA | tyrB | BDGL_001767 | BDGL_002995 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Tyrosine aminotransferase, tyrosine repressible, PLP-dependent. | 0.951 |
| aroA | ubiC | BDGL_001767 | BDGL_001840 | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Chorismate pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.894 |
| aroC | ADY82155.1 | BDGL_001055 | BDGL_001569 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Monofunctional chorismate mutase precursor (CM-F); Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.956 |
| aroC | aroA | BDGL_001055 | BDGL_001767 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Bifunctional protein aroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
| aroC | basJ | BDGL_001055 | BDGL_001860 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthetase. | 0.887 |
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